RUBRIC Oxford MinION nanopore selective sequencing logfiles

Used in conjunction with corresponding MinION nanopore fast5 sequence datasets, the logfiles in this repository provide information on how individual reads were handled by the RUBRIC (Read Until with Basecall and Reference Informed Criteria) selective sequencing software, i.e., whether individual reads were admitted to the selection process and whether they then received "skip" or "sequence" decisions. Details of the corresponding experiments and analysis of selective sequencing results for these datasets are provided at https://doi.org/10.1101/460014 .

Data and Resources

Additional Info

Field Value
Author Michael Bartsch
Version 1.0
Last Updated June 23, 2024, 17:28 (UTC)
Created June 23, 2024, 17:27 (UTC)
Citation Michael Bartsch 2019. RUBRIC Oxford MinION nanopore selective sequencing logfiles. CyVerse Data Commons. DOI 10.25739/71ne-xy91
Date created in discovery environment 2019-01-31 22:36:13
Date last modified in discovery environment 2020-02-20 22:05:33
contributor Raga Krishnakumar, Harrison Edwards
fundingReference US Department of Energy
identifierType DOI
publisher CyVerse Data Commons
relatedIdentifier doi: https://doi.org/10.1101/460014 , https://www.ncbi.nlm.nih.gov/bioproject/PRJNA491460
resourceType Selective sequencing logfiles