Phenotype and genotype data from Chibas sorghum breeding program

Phenotype and genotype data for the breeding program founders and training population from the Chibas sorghum breeding program based in Port-au-Prince Haiti. Repository contains data needed to build a sorghum Practical Haplotype Graph and use it to predict genotypes for new individuals from low-coverage skim sequence data. Data is used as described in “A sorghum Practical Haplotype Graph facilitates genome-wide imputation and cost-effective genomic prediction”

Data and Resources

Additional Info

Field	Value
Author	Sarah Jensen
Last Updated	June 23, 2024, 17:19 (UTC)
Created	June 23, 2024, 17:18 (UTC)
Citation	Sarah Jensen 2019. Phenotype and genotype data from Chibas sorghum breeding program. CyVerse Data Commons. DOI 10.25739/nccb-0k78
Date created in discovery environment	2019-09-19 13:12:41
Date last modified in discovery environment	2020-02-20 22:05:33
analysis_tool	https://bitbucket.org/bucklerlab/p_sorghumphg/src/master/
compressed_data	true
identifierType	DOI
publisher	CyVerse Data Commons
relatedIdentifier	PRJNA575060
resourceType	sorghum genotypes phenotypes