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deprecated_Dysregulation of expression correlates with rare-allele burden...
Data in this directory is associated with Kremling et al., 2018, Nature. The data types in this directory tree are the matrix of gene expression counts of an average of 255... -
Dysregulation of expression correlates with rare-allele burden and fitness...
The data under this DOI include gene expression counts from a diversity panel of maize collected from 7 tissues (Goodman-Buckler Diversity panel or '282 panel'). Also contained... -
Stomatal Microtubule Detection Dataset
The dataset is utilized for the application of methods detailed in the paper titled "Segmenting Tubular Structures in Biological Images via Geometry-Aware Stretching Active... -
JZhang_LCondon_CONUS_Topography_Sep2020
This is a national topographic dataset that can support physically based hydrologic simulations at 1km and 250m spatial resolution over contiguous United States. A R package... -
Yang et al., 2017 Data for PVP deleterious alleles
Data described here is associated with the Yang et al., 2017, PLOS Genetics. The data types in this directory tree are: GERP annotation data, bam and SNP data, and ReadMe text... -
Genotype and phenotype for 962 biomass sorghum accessions
DNA of each accessions was digested with ApekI. Bar-coded DNA of 96 accessions was pooled and sequenced with a Genome Analyzer II. The short reads were aligned to BTx623... -
Plant CT
computed tomography dataset of soy, tomato, and wheat plants in weeks 2 through 5 of growth under high and low water conditions -
Phenotype and genotype data from Chibas sorghum breeding program
Phenotype and genotype data for the breeding program founders and training population from the Chibas sorghum breeding program based in Port-au-Prince Haiti. Repository contains... -
Predicting protein temperature sensitivity across the prokaryote-eukaryote divide
Protein thermostability is important for fitness, but it is difficult to measure stability for every protein in the proteome. Fortunately, protein thermostability is correlated... -
Protein stability profiles reflect plant species' evolutionary history
Protein thermostability predictions for Arabidopsis, maize, and poplar created using prokaryote protein optimal temperatures to estimate site-specific temperature sensitivity.... -
Comparative analysis of reference transcriptome atlas and insight into...
This folder contains generated data from a RNA-seq based study of a chia (Salvia hispanica) panel of 13 tissue types and developmental stages... -
International Oryza Map Alignment Project
This data package contains processed data from the International Oryza Map Alignment Project (IOMAP) covering annotation and comparative genomics in 13 species of the Oryzeae... -
Whole-genome sequence of phages p000v and p000y infecting the bacterial...
We report here the genome sequence and morphological characterization of phages p000v and p000y that infect the bacterial pathogen Shigatoxigenic Escherichia coli O157:H7 and... -
Heritable temporal gene expression patterns correlate with metabolomic seed...
Data in this directory is part of supporting information of the manuscript by PBJ titled “Heritable temporal gene expression patterns correlate with metabolomic seed content in... -
Multi-omics prediction of oat agronomic and seed nutritional traits across...
The data published here is the raw multi-omics data used for the paper titled "Multi-omics prediction of oat agronomic and seed nutritional traits across environments and in... -
Estimating forage utilization with drone-based photogrammetric point clouds
RTK-GPS ground control points for plot locations. UAV imagery from DJI Phantom 3 and 4 with location information saved in EXIF tag metadata. Data are intended for structure from... -
Innovations to expand drone data collections and analysis for rangeland monitoring
This drone imagery data is used to support a research project investigating the ability to map ecological states across the Santa Rita Experimental Range (SRER) in southern... -
Bangladesh Inundation History
The Bangladesh Inundation History dataset contains the model output published in the paper "Giezendanner et al. 2023, Inferring the past: a combined CNN--LSTM deep learning... -
Genomes to Fields 2022 Maize Genotype by Environment Prediction Competition
The dataset contains the data used in the Genomes to Fields 2022 Maize Genotype by Environment (G x E) Prediction Competition, including phenotypic, genotypic, soil, weather,... -
Genomes to Fields and Indigo Ag Microbiome Data 2017-2018
The data set contains results from a microbial survey project produced from a joint effort between the Genomes to Field (G2F) initiative and Indigo Ag. In this project Indigo...